Welcome to peasel’s documentation!

Some python wrappers for a little bit of Sean Eddy‘s excellent Easel library for sequence manipulation.

At present, it’s just a Python API to the Simple Sequence Index (SSI) format for rapid sequence retrieval from large files.

• Installation
• Example Usage
  • Create an index file
  • Retrieving sequences from an index
  • Using a temporary index
• API documentation
  • peasel Module

License

Distributed under the GPLv3. Easel source code is distributed under the Janelia Farm License, included in the easel-src subdirectory.

Indices and tables

• Index
• Module Index
• Search Page